rs38532851 SNP Detail

Summary

• ID
  rs38532851
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:10969161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAAAGAGA CAGGAGACCT
  GACTGCCAAA CACAAGTGAG TCTCTAGAGG CACTTTGTGC GTAAGCATTC TTGAAGACTG
  AGGACCAGGT TGTGTCAATG GGTCCATACA ATTCCCTGCC TCTGTTGACT GCACTGAAGT
  TTCCACAGCA CAGTTTTCCT GTTCATGAAG AGTCACAGAG CAGAATTCAG GGCTGATGAA
  S
  AAGTCATTTA CAAAAAGAAG ATGAGGAGGA AGAAAGAAGA GGAGGAGGAG GAAGAAAAGA
  AGAGAGCAGG GAGAAGAACA GGAGGAGGCG AGGAAGAAAA GGAGGAGGAG AAAAGAAAAA
  GAGGAAGAAG AAAAGATTAA GGAAAAAGGA GAGGAGAAGG AGGAGGAGGA GGAGGAGGAG
  GAGAGGAAGA AGAAGAAGGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51942758	NES14965338	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38532851					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51942758	NES14965338	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:10969161 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd130e	DNA segment, Chr 8, ERATO Doi 130, expressed	1091 bp proximal
Gm32594	predicted gene, 32594	458 bp downstream
Gm44955	predicted gene 44955	within coordinates