ACAGCAGGTG CCAGTTGCTA ATGAGTAGGG CAGAGTTCAA GAGGGGGCAG TCCCACAGCT CTCTGAGAGG GAGGCAGGGG GAAAGGGCCC ATGTTCCTGC CTCTTTTGGG CTTCCTGAAC TTTCCAGAGA TCTGTCACGG GGATCACAAT GCTTGAGTGT CTGCTGCAGC CTTTGGAAGC TACAGAAGAG CGCGAGCTAC R TGGACTTTGA GTGATTGATG TGCCATGGCT TTCTGGTTCT CCTGCCTCTG CAGGCTTCCT CGTGGTTGCC TCTGAGCCCT AGTCTAAGCT CCCTTCCTGC ATTTACTGCA TTCGGGCTGC GGTTACTGGA GTAAGGCAGT TGAGGTCCAG CTCAGCCTGG AGCTGTGTGT GTGGCTGTGA GGCCCAGCCT GCTGCCTAAC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
KK/HlJ |
NOD/ShiLtJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51106135 | NES14353446 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | A | G | G | G | G |
SNP Consensus Information | |||||||||||||
SNP | Consensus Type | A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
KK/HlJ |
NOD/ShiLtJ |
WSB/EiJ |
||||
rs38626197 | SNP | G | G | G | A | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51106135 | NES14353446 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr13:49596673 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Ippk | inositol 1,3,4,5,6-pentakisphosphate 2-kinase | within coordinates | ||||||
Rr276358 | regulatory region 276358 | 73 bp distal | ||||||
Rr279503 | regulatory region 279503 | 1722 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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