rs38634348 SNP Detail

Summary

• ID
  rs38634348
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:33961304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCAGAGA TCAGTAGCTT
  TCCTGGTACC AATATTCAGA TATACCAAGA AAGAAATTAG GGCAACAACC CCATTTAAAG
  TACTTTCAAA ATAAAATAAA ATAAAATAAA ACAAAATACT TTGGAATGCA CTTAACTAAG
  GAAGCGAAGG GCCTCTACAA GGAAAATATA GAAACATTGA AGAAAGAAGT CGACGAAGAG
  R
  CTAGGAGTAG TGGCTAGCCT TGCACTACGT ACCTACTTGG AGATTAATGT GTATAGAGGT
  CCTGACTCCT TTAAACTTAT GTCATCAAGT TTATCAATCT TGTTCAGATG GCTCCTCATG
  GCCTGTCTTT CATGATCTGT TTTTTCCCTC AGACTGCCTT GTTATCTTAT AATCTGTTGA
  CATCACAAGA TCTGATGTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50942630	NES13471456	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38634348					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50942630	NES13471456	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:33961304 () rs orientation: forward

Symbol	Name	Function Class
Dst	dystonin	Intron
Gm37354	predicted gene, 37354	232 bp upstream
Tssr6161	transcription start site region 6161	245 bp upstream