rs387173403 SNP Detail

Summary

• ID
  rs387173403
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  138
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:19584642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA CACACACAAA TATATATATA
  Y
  ATATATATAT ATATATATAT ATATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BR/cdJ	C58/J	DBA/1J	FVB/NJ	I/LnJ	KK/HlJ	NZW/LacJ	SEA/GnJ	ST/bJ	WSB/EiJ	ZALENDE/EiJ
ss644615280	FVB_NJ_18_19610086	EVA_MGPV3	EVA_MGPV3	f	SNP	T	C	T	T	C	T	C	T	C	C	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BR/cdJ	C58/J	DBA/1J	FVB/NJ	I/LnJ	KK/HlJ	NZW/LacJ	SEA/GnJ	ST/bJ	WSB/EiJ	ZALENDE/EiJ
rs387173403					SNP	T	C	T	T	C	T	C	T	C	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss644615280	FVB_NJ_18_19610086	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:19584642 () rs orientation: forward

Symbol	Name	Function Class
Gm7718	predicted gene 7718	within coordinates
Rr393367	regulatory region 393367	752 bp upstream