rs387319092 SNP Detail

Summary

• ID
  rs387319092
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  138
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124748611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCT CCTCCTCCTC CTCCTCCTCC
  A
  CCACCACCAC CACCACCACC ACCAC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	CBA/J	CE/J	DBA/1J	DBA/2J	KK/HlJ	LG/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	QSi3/Ianm	QSi5/Ianm	SJL/J	ST/bJ	SWR/J
ss642064821	FVB_NJ_8_126545772	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	CBA/J	CE/J	DBA/1J	DBA/2J	KK/HlJ	LG/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	QSi3/Ianm	QSi5/Ianm	SJL/J	ST/bJ	SWR/J
rs387319092					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss642064821	FVB_NJ_8_126545772	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124748611 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21265	CpG island 21265	26 bp distal
Mir1967	microRNA 1967	769 bp upstream
Taf5l	TATA-box binding protein associated factor 5 like	475 bp upstream
Tssr80012	transcription start site region 80012	671 bp downstream
Tssr80013	transcription start site region 80013	357 bp downstream
Tssr80014	transcription start site region 80014	342 bp downstream
Tssr80015	transcription start site region 80015	293 bp downstream
Tssr83422	transcription start site region 83422	917 bp upstream
Tssr83423	transcription start site region 83423	766 bp upstream
Tssr83424	transcription start site region 83424	427 bp upstream
Urb2	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	within coordinates