TCCCT CCCTGCCTGC CTCCCTCCCT C CCTCCCTCCC TCCCTCCCTC CCTCC C = C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | AKR/J |
B10.RIII-H2 |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10SnJ |
CZECHII/EiJ |
LG/J |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
QSi5/Ianm |
RIIIS/J |
SJL/J |
SM/J |
SPRET/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss921417502 | MGP_WTSI_12_74012237 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C |
SNP Consensus Information | ||||||||||||||||||||||
SNP | Consensus Type | AKR/J |
B10.RIII-H2 |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10SnJ |
CZECHII/EiJ |
LG/J |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
QSi5/Ianm |
RIIIS/J |
SJL/J |
SM/J |
SPRET/EiJ |
||||
rs387443572 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss921417502 | MGP_WTSI_12_74012237 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | C/G |
Location: Chr12:74059011 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr257360 | regulatory region 257360 | 1011 bp distal | ||||||
Rr257361 | regulatory region 257361 | 1590 bp proximal | ||||||
Rr261259 | regulatory region 261259 | 11 bp distal | ||||||
Rr264147 | regulatory region 264147 | 1044 bp distal | ||||||
Syt16 | synaptotagmin XVI | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 12/17/2024 MGI 6.24 |
![]() |
|