rs38751211 SNP Detail

Summary

• ID
  rs38751211
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:73818676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGTTTTG CTGATTTAAA
  GCAAACTACA GTAATGATCA TTTATATTTG AACAAGGTCC CTGGGTGAGA TTTCTGGGTC
  ATTGCAAACC TCAGCAACCT CACTAGAGTG GGTCACTTTT ATCCCTAGCA GAAAGTTCTA
  TTCCCAGCAA GCCATTAAAT GGAGGCTTCA TGCTTAATTC ATTTGTTTTT CAGGGGCAGT
  Y
  AGAAAAAGGA CCATATTGAG AGCTTGGGGG ACTCTTGTTT AACTAGAAAT ACAGATAATA
  TACAAGAAAG GGAAAGAACA AAGGACAAGA ATCAGACACA ATGGAGTTGG GTTTTGAGCC
  ATGATTACAG GTAGCTTCAG GATTAAGCTA AGAATTACAG TTAATTGTCC ATATAGTGGG
  GATACTGAAC TGACATCATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51965894	NES14985087	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38751211					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51965894	NES14985087	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:73818676 () rs orientation: forward

Symbol	Name	Function Class
B930093H17Rik	RIKEN cDNA B930093H17 gene	872 bp upstream
Large1	LARGE xylosyl- and glucuronyltransferase 1	within coordinates