rs38783747 SNP Detail

Summary

• ID
  rs38783747
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:136095434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGG TCATTCAGAA ATAGGTTGTC
  R
  AGAAAAAGAA GTGAACAGAA AAACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss51446007	NES13995216	PERLEGEN	MM_PANEL2	f	SNP					A	G
ss133829228	ENSMUSSNP3448326	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss321993330	CHEV_6_136068454	CHEVERUD	SCREENING_POP	f	SNP				A			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs38783747					SNP	A	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51446007	NES13995216	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:136095434 () rs orientation: forward

Symbol	Name	Function Class
Grin2b	glutamate receptor, ionotropic, NMDA2B (epsilon 2)	within coordinates
Tssr2039	transcription start site region 2039	1851 bp upstream