rs39066998 SNP Detail

Summary

• ID
  rs39066998
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:83093434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCTCAAAG GCTCAGTGGC
  TCATGCAGCT TTTGCTGTTA TTTAATTTAA GATGGAAAAA GAACAAAAGA CCTGAACAGT
  GAAGGCTGGT AACAGCCCCA AGGCTTTAAG ACCCACAAGA ATCCATGTGC CGCCCATCTG
  GCTCACAAAT CTGATTTAGT AGAAGGCCGT TCAGGAGATG TAATACTTGA GAAGATTCTC
  M
  TCTGTAGGTT TTAGAAGTTT CTTATCTGCC ATATTCACTA CCCAGCCAGG AGCAAGACCA
  AAGAAAATCT TCCTTGGACC CTTCTGAGTG CAGAGCATTC TGAAGAGTTC ATCTTTCGTG
  TTATCAGGAA GAACTTAGTC ATACATCATG GTGAGTTCAT GCCTTGCTTT AGGAAACTTG
  GCAGGGTCAG CCAGGAACCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51537535	NES14625668	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	C	C	C	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs39066998					SNP	A	A	A	A	A	A	A	A	A	A	C	C	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51537535	NES14625668	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:83093434 () rs orientation: forward

Symbol	Name	Function Class
Gm49050	predicted gene, 49050	within coordinates