rs4136742 SNP Detail

Summary

• ID
  rs4136742
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  109
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51260580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAG ATAGTCTAAG ATAAATAGTC
  R
  TTAGGTTCTG GACCTGCAAC ATTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	LG/J	SM/J
ss5107508	WI_WGS_3_51787490	WI	MOUSE	f	SNP	G	A
ss320762367	CHEV_3_51157081	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	LG/J	SM/J
rs4136742					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51260580 () rs orientation: forward

Symbol	Name	Function Class
Rr576282	regulatory region 576282	212 bp proximal
Rr576283	regulatory region 576283	394 bp proximal
Rr576284	regulatory region 576284	1053 bp proximal