rs4138017 SNP Detail

Summary

• ID
  rs4138017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  109
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40990545 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTG TTCTGTCTCC TTACCTGCTT
  R
  GTGTCACGAC AGGTAGACCA CTATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C57BL/6J	LG/J	SM/J
ss5108787	WI_WGS_9_41286006	WI	MOUSE	f	SNP		A	G
ss136344843	ENSMUSSNP1717737	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322922286	CHEV_9_40887332	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C57BL/6J	LG/J	SM/J
rs4138017					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40990545 () rs orientation: forward

Symbol	Name	Function Class
Rr206246	regulatory region 206246	55 bp proximal
Ubash3b	ubiquitin associated and SH3 domain containing, B	within coordinates