rs4138468 SNP Detail

Summary

• ID
  rs4138468
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  109
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:32115695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCAAAAAG CTTCAGTTTT
  GTAAGAAGAA AGGGTTTTGG AATTGGTTGT ATAACAATGT GAATATATTT AACTGCTGGA
  TTGTATTCTT AAAATGGATA AAGCAGCAAT TCTGTACTAT GTTTACTTTT CTAGTGAATT
  CAAAAATATA TTCTATTAAT TCTTTAACAG TGTCAGACGA TGTATTTTGA ATTTTGATCA
  W
  TTTTACTCTC AGTTCCTCCC TTTACTCCTC TCAAGCTGTA CCCCAACCTG GCTACACCTC
  CCCTTTCCTC ACAGTTAATT CTTAATGGAA AATTTAATCA GAGAAAGACA GCAGAGAAGA
  GACAAAAGCA AATGAGAATT GTCTACTCGA ACTTTGAACA TACTTAACCA AACTAGACAG
  TGCAGAAAGG TGGGCCTGGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss5109240	WI_WGS_12_26168736	WI	MOUSE	f	SNP	T		A
ss137572545	ENSMUSSNP2903980	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs4138468					SNP	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:32115695 () rs orientation: forward

Symbol	Name	Function Class
Gm51992	predicted gene, 51992	within coordinates
Gm60244	predicted gene, 60244	within coordinates