rs4139793 SNP Detail

Summary

• ID
  rs4139793
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  109
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:50963655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCCT GGATGTCCTG GAACTCACTT
  W
  GTAGACCAGG CTAGCCTCGA ACTCA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss5110572	WI_WGS_2_51577037	WI	MOUSE	f	SNP	A		T
ss146549394	ENSMUSSNP4189949	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs4139793					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:50963655 () rs orientation: forward

Symbol	Name	Function Class
Gm32360	predicted gene, 32360	within coordinates
Rr556806	regulatory region 556806	848 bp distal
Rr556807	regulatory region 556807	262 bp distal