rs4139835 SNP Detail

Summary

• ID
  rs4139835
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  109
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:50963668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAA CTCACTTTGT AGACCAGGCT
  R
  GCCTCGAACT CAGAAATCCA CCTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss5110614	WI_WGS_2_51577050	WI	MOUSE	f	SNP	G		A
ss146549399	ENSMUSSNP1074948	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs4139835					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:50963668 () rs orientation: forward

Symbol	Name	Function Class
Gm32360	predicted gene, 32360	within coordinates
Rr556806	regulatory region 556806	861 bp distal
Rr556807	regulatory region 556807	275 bp distal