rs4140088 SNP Detail

Summary

• ID
  rs4140088
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  109
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:37805072 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ACACACACCA GCACACACCT GCCCATGCAT GACATATACC
  ACACAGGCAC ACACATGCAT ATCACAGACA CACACAGACA CACAGACACA CAGACACACA
  S
  ACACACACAC ACACACACAC ACACACACAC ACGAGCAAAG AAAATCCTCT AGAATAAAGA
  CAGGGCTTCC CATTCTCATG ACTTCTCAAT CCATAACTGA A                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J
ss5110868	WI_WGS_5_36546772	WI	MOUSE	f	SNP			G	C
ss148253678	ENSMUSSNP6855611	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J
rs4140088					SNP	C	G	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:37805072 () rs orientation: forward

Symbol	Name	Function Class
D5Mit354	DNA Segment, Chr 5, Massachusetts Institute of Technology 354	within coordinates
Stk32b	serine/threonine kinase 32B	within coordinates