rs4151933 SNP Detail

Summary

• ID
  rs4151933
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:55796110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGC TAGGGCTGGC AGCCTTATTT
  R
  TTGAGTCATC TCATTTGTTC TAGAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
ss6350451	mCV23432518_53290820	CRAMUS	CRAMUS_MOUSE	f	SNP		A	G			G		G
ss6394254	C77534_397	TWGNF	TWGNF-Mouse	r	SNP	T			C	C	C	C	C
ss39447123	mCV23432518	ABI	CRAMUS_MOUSE	f	SNP		A	G			G		G
ss148157703	ENSMUSSNP3491743	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G					G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
rs4151933					SNP	A	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6394254	C77534_397	TWGNF	TWGNF-Mouse-2	r	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:55796110 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8325	CpG island 8325	917 bp distal
Gm28037	predicted gene, 28037	within coordinates
Rr404882	regulatory region 404882	1886 bp downstream
Tssr138799	transcription start site region 138799	1947 bp downstream
Tssr138800	transcription start site region 138800	1917 bp downstream
Tssr138801	transcription start site region 138801	1883 bp downstream
Tssr138802	transcription start site region 138802	1855 bp downstream
Tssr138803	transcription start site region 138803	540 bp downstream
Tssr141546	transcription start site region 141546	1222 bp upstream
Tssr141547	transcription start site region 141547	1140 bp upstream
Zbtb11	zinc finger and BTB domain containing 11	within coordinates
Zbtb11os1	zinc finger and BTB domain containing 11, opposite strand 1	1130 bp upstream