rs4156563 SNP Detail

Summary

• ID
  rs4156563
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:6804227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGC CCAAGTCACA GACAGAGCTC
  Y
  ACTGATGTTG CCACAAAAGT CTATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6318515	mCV25197054_4623452	CRAMUS	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss39479569	mCV25197054	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss147788377	ENSMUSSNP2107672	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss325101901	CHEV_16_6986456	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4156563					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:6804227 () rs orientation: forward

Symbol	Name	Function Class
Rbfox1	RNA binding protein, fox-1 homolog (C. elegans) 1	within coordinates
Rr511178	regulatory region 511178	within coordinates
Tssr136955	transcription start site region 136955	336 bp upstream