rs4161638 SNP Detail

Summary

• ID
  rs4161638
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:10956295 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTTAGCCTT GAACTCAGAG ATCTGCCTGA CTCTGTCTCC
  AGAATGATGG GACTAAAGGT GTGTGCCACC ACCACCTAGT ACTTGTTTTT TATTTTATAT
  R
  TATATGAATA TGCCTGAGTA TGTATGAGAC TGAAAGATCA TGTCTCATCC CTTGGAACTG
  AAGTTACAGG TAGCTGTAAG CCACTTGATA TGTGTAATA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss6323652	mCV22788898_8768690	CRAMUS	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss39462362	mCV22788898	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4161638					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:10956295 () rs orientation: forward

Symbol	Name	Function Class
D16Mit164	DNA segment, Chr 16, Massachusetts Institute of Technology 164	1261 bp proximal
Gm61125	predicted gene, 61125	within coordinates
Zc3h7a	zinc finger CCCH type containing 7 A	within coordinates