rs4161641 SNP Detail

Summary

• ID
  rs4161641
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:10957863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTG CCTTTCATTT AAAGGGGGGA
  R
  GAAGAGGAGA ACCACATCAC TGATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss6323655	mCV22788889_8770258	CRAMUS	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss39422731	mCV22788889	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss147850707	ENSMUSSNP6686629	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4161641					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:10957863 () rs orientation: forward

Symbol	Name	Function Class
D16Mit164	DNA segment, Chr 16, Massachusetts Institute of Technology 164	157 bp distal
Gm61125	predicted gene, 61125	within coordinates
Zc3h7a	zinc finger CCCH type containing 7 A	within coordinates