rs4164119 SNP Detail

Summary

• ID
  rs4164119
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:14182277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAG GAAATGGCTC AGTGCGCAAG
  Y
  GTGCTTGATG TATTAGCAGG GAGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss6326154	mCV24578479_11968932	CRAMUS	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss39423514	mCV24578479	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss147870782	ENSMUSSNP6372568	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4164119					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:14182277 () rs orientation: forward

Symbol	Name	Function Class
Abcc1	ATP-binding cassette, sub-family C member 1	within coordinates
Rr324961	regulatory region 324961	1676 bp distal
Tssr137194	transcription start site region 137194	1311 bp upstream