rs4167071 SNP Detail

Summary

• ID
  rs4167071
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:28722014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAT TTCCTAGACC CCTCAAATGG
  Y
  TCAGAAGAGG TACCATCTAG AGATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss6329127	mCV22674817_26412659	CRAMUS	CRAMUS_MOUSE	f	SNP		C	T					C		C
ss39465051	mCV22674817	ABI	CRAMUS_MOUSE	f	SNP		C	T					C		C
ss60201953	NES15703419	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	T	C	C		C	C	C	T		C	C	T	C		C
ss147914076	ENSMUSSNP733802	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T							C
ss325126491	CHEV_16_28903348	CHEVERUD	SCREENING_POP	f	SNP													T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs4167071					SNP	C	C	T	T	T	C	C	C	C	C	C	T	T	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60201953	NES15703419	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:28722014 () rs orientation: forward

Symbol	Name	Function Class
Mb21d2	Mab-21 domain containing 2	within coordinates
Rr513964	regulatory region 513964	1998 bp proximal
Tssr140667	transcription start site region 140667	647 bp upstream