rs4170181 SNP Detail

Summary

• ID
  rs4170181
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:32150326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAACTGAGGA CCTTGGGAAG AGCAGTCAGT GCTCTCAACT
  GCCGAGTCAT CTCATCAGCC CTCCTAATGC CCCTTTCATC ATGTTTTTTT TTCGAGACAG
  R
  GTTTTTCTGT GTAGCCCTGG CTGTCCTTGT CATTCTGTAG ACCAAGCTGG CCTCAAACTC
  AGAAATCCGC CTGCCTCAGT CTCCCAAGTG CTGGGATTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6332259	mCV25150788_29815992	CRAMUS	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss39441223	mCV25150788	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss147947583	ENSMUSSNP424606	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss325136311	CHEV_16_32331594	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4170181					SNP	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:32150326 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8188	CpG island 8188	511 bp proximal
Gm59802	predicted gene, 59802	347 bp downstream
Rr404777	regulatory region 404777	505 bp upstream
Tssr137967	transcription start site region 137967	730 bp upstream
Ubxn7	UBX domain protein 7	749 bp upstream