rs4170863 SNP Detail

Summary

• ID
  rs4170863
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:32700495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAACA TGTTTATTGG ATGCTAGGCT
  R
  TAAACTAAAC ATTTAATATA ATTTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss6332948	mCV25152732_30359384	CRAMUS	CRAMUS_MOUSE	f	SNP	G	G	A
ss39473536	mCV25152732	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147955038	ENSMUSSNP1262534	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss325138002	CHEV_16_32880211	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs4170863					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:32700495 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8199	CpG island 8199	1550 bp distal
Fyttd1	forty-two-three domain containing 1	within coordinates
Rr514844	regulatory region 514844	1985 bp distal
Rr514845	regulatory region 514845	1454 bp distal
Rr514846	regulatory region 514846	585 bp distal
Rr514847	regulatory region 514847	1600 bp proximal