rs4170864 SNP Detail

Summary

• ID
  rs4170864
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:32700733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAA AGTTTAGTTC CCAGTGCCTA
  M
  TTTAGGCAGC TTGGCCCAGA ACGTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6332949	mCV25152733_30359622	CRAMUS	CRAMUS_MOUSE	f	SNP	A	A	C	A
ss39438127	mCV25152733	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A
ss147955043	ENSMUSSNP5411782	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss325138003	CHEV_16_32880449	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4170864					SNP	A	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:32700733 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8199	CpG island 8199	1788 bp distal
Fyttd1	forty-two-three domain containing 1	within coordinates
Rr514845	regulatory region 514845	1692 bp distal
Rr514846	regulatory region 514846	823 bp distal
Rr514847	regulatory region 514847	1362 bp proximal