rs4174844 SNP Detail

Summary

• ID
  rs4174844
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:38632412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAA GATAAAAATG CTTCTCACAC
  R
  TTTCCGATAG GAATTTTGTA AGCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6336966	mCV22999373_36222305	CRAMUS	CRAMUS_MOUSE	f	SNP	G	A	G
ss39461099	mCV22999373	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss148000183	ENSMUSSNP6760671	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss325150342	CHEV_16_38812163	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4174844					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:38632412 () rs orientation: forward

Symbol	Name	Function Class
Gm15803	predicted gene 15803	1940 bp upstream
Rr515903	regulatory region 515903	507 bp proximal
Rr515904	regulatory region 515904	673 bp proximal
Tex55	testis expressed 55	156 bp downstream