rs4174847 SNP Detail

Summary

• ID
  rs4174847
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:38633417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACACGTCTGT GAACATGCCA ACAGTCTCAG ACCTTGCCCA CCAACACAAT TAAAAAGATA
  ACAGAAAACA CTTTTAAAAA ACACTAGCGG GGTTATTTGG GCAGGGACTT TAACAGCGTG
  GGGGTTTTTC ATATGCGTTT GTACATTATT CCCTTAGAGT GTCCGTTAAC AAGGTGAGAT
  TGGCCAGGCA GTGGTGGTGC ACGCCTTTAA TCCCAGCACT TGGGAGGCAG AGGCAGGGAG
  ATTTCTGAGT AGGCCAGCCT GGTCTACAGA GTGAGTTCCA GGACAACCAG GGCTACACGG
  W
  CTCGAAAAAC AAACAAACAA AAAACAAACA AACAAAAACA AAAACAAAAA ACAAGACAAA
  ACAAAAAAAC CAAAATGAGA TTGAATTAGA AACCCAGAGA CAGCCATGAA CTCCAATACT
  TAATAACGAT TAATAGGAAA AAAAATCCAA TGTCCAAAAA TCATGAGCTG AAGAAATCAT
  AATTAAAATT AGAAACTATT TTGTAGTAAA CAAACAAACA AAAAAAACCA CAATTCAAAT
  TCCCGTGATA AAAGCTTTAA ATGAATGTAT CCCCCCCACA AAGGTTTTGT TCTTGTGTAG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss6336969	mCV22999382_36223311	CRAMUS	CRAMUS_MOUSE	f	SNP	A	T
ss39429567	mCV22999382	ABI	CRAMUS_MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs4174847					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:38633417 () rs orientation: forward

Symbol	Name	Function Class
Gm15803	predicted gene 15803	935 bp upstream
Rr515903	regulatory region 515903	208 bp distal
Rr515904	regulatory region 515904	311 bp distal
Tex55	testis expressed 55	within coordinates