rs4174850 SNP Detail

Summary

• ID
  rs4174850
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:38634034 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCC TGGTCAAATA TGACCAGATG
  S
  CCAAGGGAGC AGGGACTGTT CATAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss6336972	mCV22999391_36223914	CRAMUS	CRAMUS_MOUSE	f	SNP	C	G
ss39468644	mCV22999391	ABI	CRAMUS_MOUSE	f	SNP	C	G
ss325150347	CHEV_16_38813785	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs4174850					SNP	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:38634034 () rs orientation: forward

Symbol	Name	Function Class
Gm15803	predicted gene 15803	318 bp upstream
Rr515903	regulatory region 515903	825 bp distal
Rr515904	regulatory region 515904	928 bp distal
Tex55	testis expressed 55	within coordinates