rs4179256 SNP Detail

Summary

• ID
  rs4179256
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:43449434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCTTTACAT TAAACCAAAG ATAAGTATTT TTCTTTTCTT
  TCCTTTTTTA ATACCACAGT TTTCAAATTC TTGGTATGAG TAGACGATTT CTGAGGGAGG
  R
  AAAAAAAAAC TCCCTTGTTG ATTATTTCTG CTTGTGCTAA TATTTAGCTA ATGGCATGTT
  TGCCAGATAC TAGATTTACA GGAATCTGAA TCAAGAGAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss6341416	mCV22706900_40983637	CRAMUS	CRAMUS_MOUSE	f	SNP	G	A	A
ss39468602	mCV22706900	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss148057638	ENSMUSSNP6837141	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs4179256					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:43449434 () rs orientation: forward

Symbol	Name	Function Class
Tssr138523	transcription start site region 138523	1202 bp upstream
Tssr138524	transcription start site region 138524	1241 bp upstream
Tssr141139	transcription start site region 141139	210 bp upstream
Zbtb20	zinc finger and BTB domain containing 20	within coordinates