rs4179430 SNP Detail

Summary

• ID
  rs4179430
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:43798352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAT GGCCATTATG GAACTGGCAT
  M
  CACTCTCCAT TCCTTAGTGC AAAGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss6341590	mCV23059112_41333152	CRAMUS	CRAMUS_MOUSE	f	SNP	A	A	C
ss39472546	mCV23059112	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss148058931	ENSMUSSNP759950	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs4179430					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:43798352 () rs orientation: forward

Symbol	Name	Function Class
4930552F14Rik	RIKEN cDNA 4930552F14 gene	1354 bp upstream
Cpgi8279	CpG island 8279	1221 bp proximal
Rr516233	regulatory region 516233	1051 bp proximal
Rr516234	regulatory region 516234	1792 bp proximal
Tssr141154	transcription start site region 141154	1759 bp downstream
Zdhhc23	zinc finger, DHHC domain containing 23	within coordinates