rs4179433 SNP Detail

Summary

• ID
  rs4179433
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:43801248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACATTTGGCT TTGGTGACAC TGAGGGAAAG GAAACATTGA
  CTAAAGGCAA TGGATATTCA ATAAAAATAA ATATATGTGC GTGTTCTAGA AAGACAGCTA
  R
  AGAACAAAAC AATAAATACG TCCTGAACAT TTCCTAAATC CCGGGGGACG CAGCTAATTT
  CAAGTCAAGT CGCCAAGTCC TTATTTTCAC AAACCACTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss6341593	mCV23059100_41336068	CRAMUS	CRAMUS_MOUSE	f	SNP	A	G
ss39429187	mCV23059100	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss148058956	ENSMUSSNP2480009	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs4179433					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:43801248 () rs orientation: forward

Symbol	Name	Function Class
4930552F14Rik	RIKEN cDNA 4930552F14 gene	within coordinates
Cpgi8279	CpG island 8279	590 bp distal
Gm46552	predicted gene, 46552	within coordinates
Gramd1c	GRAM domain containing 1C	within coordinates
Rr516233	regulatory region 516233	1233 bp distal
Rr516234	regulatory region 516234	604 bp distal
Tssr141154	transcription start site region 141154	1060 bp upstream
Tssr141155	transcription start site region 141155	610 bp upstream
Zdhhc23	zinc finger, DHHC domain containing 23	1094 bp upstream