rs4179438 SNP Detail

Summary

• ID
  rs4179438
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:43803811 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAA TCTCTAGAGT TAATCTGTAG
  Y
  GTTTTCTACA ACAAAGGAAC AGGCG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss6341598	mCV23059082_41338597	CRAMUS	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss39436156	mCV23059082	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss148058987	ENSMUSSNP5231001	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4179438					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:43803811 () rs orientation: forward

Symbol	Name	Function Class
4930552F14Rik	RIKEN cDNA 4930552F14 gene	94 bp downstream
Gm46552	predicted gene, 46552	96 bp downstream
Gramd1c	GRAM domain containing 1C	within coordinates