rs4179613 SNP Detail

Summary

• ID
  rs4179613
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:44134635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAC CTAGGTAAAA GCTAGGGATG
  R
  CAGCATGCAT CTGTAACCAC AGTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6341778	mCV23985062_41671773	CRAMUS	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss39440390	mCV23985062	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss148060629	ENSMUSSNP5997131	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss325162536	CHEV_16_44314385	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4179613					SNP	A	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:44134635 () rs orientation: forward

Symbol	Name	Function Class
Rr321315	regulatory region 321315	235 bp distal
Rr321316	regulatory region 321316	366 bp proximal
Sidt1	SID1 transmembrane family, member 1	within coordinates