rs4179614 SNP Detail

Summary

• ID
  rs4179614
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:44134752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTC AGTAGAAACT GTCTCAAAAA
  W
  TAAGGTGCAG AGTGATAAAG GAAGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6341779	mCV23985072_41671890	CRAMUS	CRAMUS_MOUSE	f	SNP	T	A	T	A
ss39458182	mCV23985072	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	A
ss148060634	ENSMUSSNP4807642	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
ss325162537	CHEV_16_44314502	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4179614					SNP	T	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:44134752 () rs orientation: forward

Symbol	Name	Function Class
Rr321315	regulatory region 321315	352 bp distal
Rr321316	regulatory region 321316	249 bp proximal
Sidt1	SID1 transmembrane family, member 1	within coordinates