rs4184244 SNP Detail

Summary

• ID
  rs4184244
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:48124996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATATATG TAAGTACACT
  ATAGCTAGCT ATCTTCAGAC ACACCAGAAG AGGGCATCAG ATCTCATTAC AGATAACTAT
  GAGCCACCAT GTGGTTGCTG GGATTTGAAC TCTGGAAGAG CAGTCAGTGT TCTTAACTGC
  TGAGTCATCT CTCCAGCCCA CTAATGCAAA TTTAAAGAAC TAATGATAAA CACTAAAAAT
  R
  GTGAAATTTA GGCAAATCTT AACAGTGCTT AACCCCTCAA GTGCTTTGGA AACAGTGGTG
  TGCACCATCT CTACCAGTGG GCTATATCCC TAGCCTAATC TATGTGGTTG TTGTTACTTT
  GAAATAGGCT CAAATAGGCT TGGGTTATAT TTGGCCCAAG CTGATGTGGA ACTTGGATTC
  ATAGCTGAGT ACGACTTTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss6346462	mCV25059022_45666604	CRAMUS	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss39452786	mCV25059022	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss148113507	ENSMUSSNP1213117	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs4184244					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:48124996 () rs orientation: forward

Symbol	Name	Function Class
Rr516623	regulatory region 516623	287 bp distal
Tssr138650	transcription start site region 138650	737 bp downstream
Tssr138651	transcription start site region 138651	708 bp downstream