rs4184991 SNP Detail

Summary

• ID
  rs4184991
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:49592181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTGAGCTC ATGACTTAGT
  GTTTTATTTC GGATAGCTAC TGTGATGAAT CTAAGCTATC ATATTCATTC TGCCCTTGGG
  AAGCATTCAG CAATCCCTCA GTATCGCAGA GGATGCTGGT GACCTAGAAA AACTACTTTC
  TGTGGTATTT CTAAGAAGCC TCTTGGTTCA GGCGGCTCCT GTTCACTACA CATATGTAGT
  R
  TGGGTCAACG AACATTTGAC AGATAACCAC TTGTTTTGCT GCAGTGTGAG ATATTAAGGG
  AGCCAAATGC AAATGAGGTG TAATCGCTTC CTTTACCAGC TCACAGTCCA GTGGGAAAGA
  TACACACACA CACACACACA CACACACACA TAAACACACA CACACATACA CACACACACA
  CACACACATA CACACACACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss6347233	mCV22328403_47115209	CRAMUS	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs4184991					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:49592181 () rs orientation: forward

Symbol	Name	Function Class
Gm15518	predicted gene 15518	within coordinates
Rr516711	regulatory region 516711	1466 bp distal
Rr516712	regulatory region 516712	within coordinates
Rr516713	regulatory region 516713	599 bp proximal
Rr516714	regulatory region 516714	1910 bp proximal
Tssr138713	transcription start site region 138713	1195 bp downstream
Tssr138714	transcription start site region 138714	1008 bp upstream
Tssr141328	transcription start site region 141328	1996 bp upstream
Tssr141329	transcription start site region 141329	1015 bp upstream
Tssr141330	transcription start site region 141330	1001 bp upstream
Tssr141331	transcription start site region 141331	982 bp upstream
Tssr141332	transcription start site region 141332	955 bp upstream
Tssr141333	transcription start site region 141333	124 bp upstream
Tssr141334	transcription start site region 141334	18 bp downstream
Tssr141335	transcription start site region 141335	952 bp downstream