rs4185991 SNP Detail

Summary

• ID
  rs4185991
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:50361228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCCC CCCCCCCCTT CCTTCTCTCC
  Y
  TCTAACTCCC TGTTTCTCTG CAGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss6348256	mCV24012143_47884849	CRAMUS	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss39461945	mCV24012143	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss148131269	ENSMUSSNP6964939	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss325176290	CHEV_16_50540978	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs4185991					SNP	C	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:50361228 () rs orientation: forward

Symbol	Name	Function Class
G730013B05Rik	RIKEN cDNA G730013B05 gene	within coordinates
Gm60707	predicted gene, 60707	1950 bp downstream
Rr318669	regulatory region 318669	1773 bp proximal
Rr323833	regulatory region 323833	1803 bp proximal