rs4185992 SNP Detail

Summary

• ID
  rs4185992
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:50362337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCATC AAAGGAAAGC AGCGAGAAAC
  Y
  GAGAAACTGG TGTGTACTGG ATCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss6348257	mCV24012151_47885958	CRAMUS	CRAMUS_MOUSE	f	SNP	T	C	C
ss39434626	mCV24012151	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss148131273	ENSMUSSNP2294861	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss325176291	CHEV_16_50542087	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs4185992					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:50362337 () rs orientation: forward

Symbol	Name	Function Class
G730013B05Rik	RIKEN cDNA G730013B05 gene	within coordinates
Gm60707	predicted gene, 60707	841 bp downstream
Rr318669	regulatory region 318669	664 bp proximal
Rr323833	regulatory region 323833	694 bp proximal