rs4188155 SNP Detail

Summary

• ID
  rs4188155
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:55793092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAC AGGGTTTCTC CGTATATTAG
  M
  GCTCACTGTC CTGGAACTCA CTTTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss6350448	mCV23432497_53287802	CRAMUS	CRAMUS_MOUSE	f	SNP	C	A	A
ss39440927	mCV23432497	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss148157698	ENSMUSSNP2574879	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs4188155					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:55793092 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8325	CpG island 8325	662 bp proximal
Gm28037	predicted gene, 28037	within coordinates
Rpl24	ribosomal protein L24	1294 bp downstream
Rr404882	regulatory region 404882	831 bp upstream
Tssr138799	transcription start site region 138799	1057 bp upstream
Tssr138800	transcription start site region 138800	1082 bp upstream
Tssr138801	transcription start site region 138801	1108 bp upstream
Tssr138802	transcription start site region 138802	1152 bp upstream
Tssr141546	transcription start site region 141546	1784 bp downstream
Tssr141547	transcription start site region 141547	1812 bp downstream
Zbtb11	zinc finger and BTB domain containing 11	1154 bp upstream
Zbtb11os1	zinc finger and BTB domain containing 11, opposite strand 1	539 bp downstream