rs4194370 SNP Detail

Summary

• ID
  rs4194370
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:62144064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AACACACTCC TCTTTAAGGG GCTGGCCACT GGGAGTTTGA CCATGCTCCA GTGACTAAAA
  GAACAACACA AATTGGACGT TCAAAATGTT TTTTTTTTTT TTTGTCTGTG GGGAGCACCA
  CAAGATTTGG TCAGTGTGCG AATCAAGAAG GCCTGGGAAT TAAAATTGAT CAGGAAATAT
  GTAAAATTCC CCAATAATCA ATAAAAGTAT TGTGATTAAA GAATGTAGAC ATGCATACAA
  AGACTAATAT AATATTTTCT ATACTATACA CACACACACA CACACACACA CACACACACA
  Y
  ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATGTGCATTT ACTTCTGTGG
  TCTATGACCC CTCTGCTCAA AAATGTACAC ACTCTATGAA TATGTGACCA ACAGAAGTTG
  TAAGGATTTT CCCTCTTCTA GCTTGCATTT GGTGGGGTAG GGCTTGCATA GCTATCACAA
  TGTGAGGAAT CACAAACATT CTCAGAGCGA GATTTCAATT TTCTATGTTT CCAAACTTGA
  TGAAGCTTAC TACTAACAAT CAGTATCAAA GAGAGCTGCT TTAAAGTAAA TTCTTAACTC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss6356761	mCV24659001_59632677	CRAMUS	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss39450351	mCV24659001	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs4194370					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:62144064 () rs orientation: forward

Symbol	Name	Function Class
Rr318921	regulatory region 318921	464 bp distal