rs4202862 SNP Detail

Summary

• ID
  rs4202862
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:73260213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTATGTTTT CTTTTTTGTA
  TTCCATTCTT ATTCCAAACA GCTGGAGAGG AAATCAGAGA TACAATAATT CTAAACATTT
  AAAAACTTTT CTCTCCTTGT TATTCCCTAG GAAATGCATT TGATAATGAT ATCATATGCA
  TTGGGCTGTG TTATAAGTAA AGGGAATTTC ATTAGAAAAC AGGGTAAGAA TTATTCTTGG
  M
  ATAAAAGTGT CACGTTATTA AACTGTAATA TAGAAGTAGG CCTGGAATAA CTTGAAAAGG
  GTCCTTGTTT CACATTTTTT TATGGCTGAA AAATCTCTTC ATTCCCTCTT AAAGCAATAT
  AACAAAACAT ACAGTAGATT GTATACTTTT AGCTGAACAT AAGCATTATC TTTTTATATA
  TACATTTCAT TGGAACTTTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss6365389	mCV22548898_70720671	CRAMUS	CRAMUS_MOUSE	f	SNP	A	C	C
ss39445309	mCV22548898	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
ss148341206	ENSMUSSNP853509	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs4202862					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:73260213 () rs orientation: forward

Symbol	Name	Function Class
Gm18825	predicted gene, 18825	482 bp downstream
Rr518000	regulatory region 518000	459 bp distal