rs4202864 SNP Detail

Summary

• ID
  rs4202864
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:73261070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGCCAATC TCTTTGCACA
  GTTATGAGAT GACTTACTTT CATGACATTG GGCTGATAGT ATGCAAATGT ATTACCTTTT
  ATTAAGTTCC CACTGATTTT GAATGAGATA TTAGAATATA AGTACAATAT CTTAGAATCT
  AGGGACTCTT TTGGCTGAGT TTCTGTAGGA AGTCCAAATG AAATCTCTTG TATCAGTTCA
  Y
  TCTGTGGTGT TACCACTGAA TTGTTTACTC CCAGACACCA GTTTCTTATT TCATTTCCCG
  TTGAAAGAAA CTTAAGGGAC TAAGACTTGT TTTTAGCTTG TAGTTCAAGA TGCACTTCCC
  TGTGGGGCAG GCAAGGTGGC TGGAGAGGGA CACAGCTGGA CACATGGCAT GTACAGTCAG
  GAATCAGAGA GACTAGTGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss6365391	mCV22549080_70721528	CRAMUS	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss39451187	mCV22549080	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss148341217	ENSMUSSNP1400356	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4202864					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:73261070 () rs orientation: forward

Symbol	Name	Function Class
Gm18825	predicted gene, 18825	within coordinates
Rr518000	regulatory region 518000	1316 bp distal