rs4204204 SNP Detail

Summary

• ID
  rs4204204
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:74074570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT AACTGAAAGG CAAGGTTATC
  W
  GCTTTGTGTA ATTCTATGTC TGTAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6366754	mCV25127100_71511079	CRAMUS	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss39427546	mCV25127100	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss148351784	ENSMUSSNP4673848	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss325248279	CHEV_16_74277927	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4204204					SNP	T	T	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:74074570 () rs orientation: forward

Symbol	Name	Function Class
Robo2	roundabout guidance receptor 2	within coordinates
Tssr141729	transcription start site region 141729	1513 bp downstream
Tssr141730	transcription start site region 141730	1632 bp downstream
Tssr141731	transcription start site region 141731	1733 bp downstream
Tssr141732	transcription start site region 141732	1774 bp downstream
Tssr141733	transcription start site region 141733	1955 bp downstream