rs4206326 SNP Detail

Summary

• ID
  rs4206326
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:76170935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGCTGGGT TCAGAGTCTC AATAAATAAC AATTACATCA
  TATAGCCAGG GTGGCAATGC AGGGAAACTT GGGTTTCCTG CAGCCTGGTC TCGCTGAACC
  M
  GCCTCTAAAT TTGAGGTGGG CTAACAGATT GGTGAGGCGA GAAAGTGGAG GGAGGAGAGA
  AAAATAAGAA ACCATGATCT CTTCCTCGCC TTGTGTTTT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss6368904	mCV25279109_73583541	CRAMUS	CRAMUS_MOUSE	f	SNP	C	A	C
ss39432508	mCV25279109	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss148379012	ENSMUSSNP1795473	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs4206326					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:76170935 () rs orientation: forward

Symbol	Name	Function Class
Nrip1	nuclear receptor interacting protein 1	220 bp upstream
Rr518182	regulatory region 518182	1584 bp distal
Rr518183	regulatory region 518183	508 bp distal
Rr518184	regulatory region 518184	within coordinates
Tssr139017	transcription start site region 139017	940 bp downstream
Tssr139018	transcription start site region 139018	834 bp downstream
Tssr141820	transcription start site region 141820	944 bp upstream
Tssr141821	transcription start site region 141821	195 bp upstream
Tssr141822	transcription start site region 141822	176 bp upstream
Tssr141823	transcription start site region 141823	161 bp upstream