rs4206328 SNP Detail

Summary

• ID
  rs4206328
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:76171691 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAAAGTAA AGGCAATTTT
  TCAAATCAAT TCTTAATAAA GCTATATTCT AGCACAGTCC TGAGCACATG CAGGAAATAT
  TTTCCTTAAT GGCGATGATG GTGCATTTTA AAATACTTAT TATCTGTCCT CCTAGTGACT
  CACCTATGCA ATCTGTTGTC ATCTAAGGTA GTGTCAATCT CATGTAACAG CATAGCACTC
  R
  CATATGCCGC AGTTCAAAAT CTGCTTAAAG CAAATTAGTA AAGGCAGCAT TAATCCCAGG
  CATCATTACC TGTCCGGCAT CATTTATCCG GGATTGACAA AAAGCAAATA ATTGCAAATT
  AAATGACCAG CATAATTGTA ACTTATTAGC TCTTTAGTTT TTTTTTTTTT TGTAAATATT
  ATACAAAGAC ATTCTAAATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss6368906	mCV25279099_73584299	CRAMUS	CRAMUS_MOUSE	f	SNP	A	G	G
ss39447664	mCV25279099	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss148379015	ENSMUSSNP4528275	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs4206328					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:76171691 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8372	CpG island 8372	989 bp distal
Nrip1	nuclear receptor interacting protein 1	976 bp upstream
Rr325475	regulatory region 325475	490 bp distal
Tssr139017	transcription start site region 139017	1696 bp downstream
Tssr139018	transcription start site region 139018	1590 bp downstream
Tssr141820	transcription start site region 141820	1700 bp upstream
Tssr141821	transcription start site region 141821	951 bp upstream
Tssr141822	transcription start site region 141822	932 bp upstream
Tssr141823	transcription start site region 141823	917 bp upstream