rs4206574 SNP Detail

Summary

• ID
  rs4206574
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:76344588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGATCCAA AGACCTGATT
  CCAGGTTAAC TCTGCAAGCC CTAGAGTTAA AACTGATTTG GGGGGATGGA GTGGGGTGGG
  TAATTACTGG AACAGTGGAT GTCAAAGTTT TGGTACTTTG AGAAAGCTGT GATTCAAACC
  CTTCTTCCTG GGAACTCTGT GGTTTCTGGA GTCAAAGGCC AAGTGCTGCT ATGCACACAC
  Y
  GGCTACTTCT GTAGCCAAAG CCTTGGTTTT ATGTCTAACT CTGGTACCTC TCGAACTAAA
  AAGCCTTGGT CCTGCAGCAA ACCCTAAACC CTGCAACACC CTGAGCCAAA GACTGGTCCC
  TTGGTGAACT GCATACCAGG GAAACACTTC GATTGCTGGA CTGGCTTCAA AGAAATTGAG
  AAACTACCTT TGAAAAATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss6369154	mCV22556455_73757102	CRAMUS	CRAMUS_MOUSE	f	SNP	C	T	T
ss39482377	mCV22556455	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss148381283	ENSMUSSNP4791128	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs4206574					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:76344588 () rs orientation: forward

Symbol	Name	Function Class
Gm30726	predicted gene, 30726	1095 bp upstream
Rr370111	regulatory region 370111	1916 bp upstream
Rr518205	regulatory region 518205	1959 bp proximal
Tssr139022	transcription start site region 139022	1043 bp upstream