rs4207193 SNP Detail

Summary

• ID
  rs4207193
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:77124781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGAGTCACA GAAAGATCTC AAACATGTTT TATTTATTTA
  TTTATTTTTT GTTTTCTAAA ACTTATTCAG AGGCGATATA CAGACCAATC AATGACGCAT
  R
  TTTCACATTT GAGAAAGTGG AAACCCCAGT TTCTGCACTC AGTCTCACCC AGAGCTAACT
  TTACCACTTA TATTCTCTGT TTCTGTACTT TCAAAAAGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6369787	mCV25161212_74553442	CRAMUS	CRAMUS_MOUSE	f	SNP		G	A	G
ss39443696	mCV25161212	ABI	CRAMUS_MOUSE	f	SNP		G	A	G
ss148391567	ENSMUSSNP361273	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss325255100	CHEV_16_77328138	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4207193					SNP	A	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:77124781 () rs orientation: forward

Symbol	Name	Function Class
Gm60394	predicted gene, 60394	within coordinates
Mir99ahg	Mir99a and Mirlet7c-1 host gene (non-protein coding)	1435 bp upstream
Rr518272	regulatory region 518272	744 bp proximal
Rr518273	regulatory region 518273	1458 bp proximal
Rr518274	regulatory region 518274	1712 bp proximal
Tssr139047	transcription start site region 139047	1302 bp upstream
Tssr139048	transcription start site region 139048	1353 bp upstream
Tssr139049	transcription start site region 139049	1464 bp upstream
Tssr139050	transcription start site region 139050	1605 bp upstream
Tssr139051	transcription start site region 139051	1618 bp upstream
Tssr139052	transcription start site region 139052	1649 bp upstream
Tssr139053	transcription start site region 139053	1678 bp upstream
Tssr139054	transcription start site region 139054	1736 bp upstream
Tssr141826	transcription start site region 141826	1632 bp downstream