rs4207301 SNP Detail

Summary

• ID
  rs4207301
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:77157928 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATACACCTGG TGTATGGCAG GCTGGTATAG TGAAATTCTA
  GCATGGGGCG TTTGAGGCAG GAGCATCATA AGCTCAAGGT CATCAGTTGT TACTGGATAA
  R
  GTACCAAGAA GGATATTGTA CGGTAGGATC ATTAATTATC CCGAATTGCA AACATGCCAT
  GCCTAAGCTG GTGAAACGCT TGTCAGGTTT CTCTGAACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss6369895	mCV24105241_74588249	CRAMUS	CRAMUS_MOUSE	f	SNP	G	G	A	G	A
ss39431362	mCV24105241	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	A
ss148392312	ENSMUSSNP4203661	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4207301					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:77157928 () rs orientation: forward

Symbol	Name	Function Class
D16Mit217	DNA Segment, Chr 16 Massachusetts Institute of Technology 217	168 bp proximal
Mir99ahg	Mir99a and Mirlet7c-1 host gene (non-protein coding)	within coordinates
Tssr139060	transcription start site region 139060	478 bp upstream
Tssr139061	transcription start site region 139061	1401 bp upstream