rs4207303 SNP Detail

Summary

• ID
  rs4207303
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:77159076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGCACACA CCTTTAATCC CGGCACTTGG GAGGCAGAGA
  CAGGCAGATT TCTGTTAGTT CAGGTCAGTC TGGTCTACAG AAAAAGTTTC AGGACAGCCA
  K
  AACTACACAG AAATACCAAG TCTTGAAAAA TATTAAATAG TATTAAATTA CTTATATGTA
  TTTGTGGGGT TTGTGTAAAG TCCATTAAAA CAACGGTCA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6369897	mCV24105243_74589410	CRAMUS	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss39434321	mCV24105243	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss148392327	ENSMUSSNP6226889	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss325255225	CHEV_16_77362433	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4207303					SNP	G	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:77159076 () rs orientation: forward

Symbol	Name	Function Class
D16Mit217	DNA Segment, Chr 16 Massachusetts Institute of Technology 217	762 bp distal
Mir99ahg	Mir99a and Mirlet7c-1 host gene (non-protein coding)	within coordinates
Tssr139060	transcription start site region 139060	662 bp downstream
Tssr139061	transcription start site region 139061	253 bp upstream