rs4207304 SNP Detail

Summary

• ID
  rs4207304
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:77159314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTATTAAA TTACTTATAT
  GTATTTGTGG GGTTTGTGTA AAGTCCATTA AAACAACGGT CATAGGAGTA ACTCTTCTCA
  CCTGACATCA CATATAAATA TTACTGTGGG TTTTTCTGTT ATTTTGTGTT CCTAGGTGGA
  AAGCCCCCTT ATCTATAAAT AGGAATTTTA GGTGCCTTCT GTCCTTTTGT TTTGGTTTTT
  K
  GTTTTTTTTT GTTTTTTTGT TTTTTTGCTA TAACATAAGA TTTTTCAGTT CATTGTTTAA
  TGGCACAGTG GTAGCTTACA GATGAACACG AAATGACTAA ACAATATTTG GGTTTTCCAG
  GTTTTATTTA GAATGAATGA CTTTCAAGAT TGTCATTTAA GTATGACATT GACTATTTAA
  TGTATTTTTA AATCACTAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss6369898	mCV24105252_74589648	CRAMUS	CRAMUS_MOUSE	f	SNP	T	G	G
ss39462213	mCV24105252	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs4207304					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:77159314 () rs orientation: forward

Symbol	Name	Function Class
D16Mit217	DNA Segment, Chr 16 Massachusetts Institute of Technology 217	1000 bp distal
Mir99ahg	Mir99a and Mirlet7c-1 host gene (non-protein coding)	within coordinates
Tssr139060	transcription start site region 139060	900 bp downstream
Tssr139061	transcription start site region 139061	15 bp upstream