rs4207725 SNP Detail

Summary

• ID
  rs4207725
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:77643967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAGGGTGT CTGCCAACTC
  TGTGCCCAAG ATGACCCAGT GCTGGCACCA ACCGGAAGGT GACATTTTAT GTTTTTAACT
  GGAAGAAAAC AGTCTTTCTG AAAAACAAGA GGCAATGTCC TACCAGCCTG ATACATTAGA
  GGAACCTGGA TTAGGAAACT AACATGGATA AGAACTCAAC TTAGAAATTT CTTTTAAGTG
  Y
  TGAAGGCACA TGTTCTTCTC ATTTGCATGT GATGTTATGA AAAGCCATAT CAACCCAAAA
  CTGGCTAGTG TACAGCAAAG TTAGAGAGAG GCACACATGG TAACATAGGG CAGACTGTAA
  CCTGCATAGC TAATGTTGGT GTTGCTTTTA TTTTGACATG GACATATTTG TCATTGCATT
  AAAATATATC CTGGGATCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss6370320	mCV22558540_75073408	CRAMUS	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss39467150	mCV22558540	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss148395715	ENSMUSSNP45942	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4207725					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:77643967 () rs orientation: forward

Symbol	Name	Function Class
Gm17333	predicted gene, 17333	within coordinates